Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein | DW935_00440 | Not Available | Negative | 101467 - 101880 | 15105.8 |
| tetr/acrr family transcriptional regulator | DW935_00445 | Not Available | Negative | 102663 - 103439 | 30174.4 |
| hypothetical protein | DW935_00450 | Not Available | Negative | 104009 - 104581 | 21981.5 |
| hypothetical protein | DW935_00455 | Not Available | Negative | 104587 - 105201 | 23236.6 |
| type vi secretion system contractile sheath protein tssc | DW935_00460 | Not Available | Negative | 105314 - 106693 | 52717.4 |
| hypothetical protein | DW935_00465 | Not Available | Negative | 106706 - 107173 | 17242.5 |
| lysozyme | DW935_00470 | Not Available | Positive | 107341 - 107763 | 16326.8 |
| hypothetical protein | DW935_00475 | Not Available | Positive | 107771 - 109546 | 67921.0 |
| atp-dependent clp protease atp-binding subunit | DW935_00480 | Not Available | Positive | 109543 - 111981 | 90775.5 |
| hypothetical protein | DW935_00485 | Not Available | Positive | 111966 - 112901 | 35890.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

