Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_08915 | Not Available | Positive | 2104880 - 2105758 | 33797.1 |
| hypothetical protein | DW935_08920 | Not Available | Positive | 2105946 - 2107196 | 48384.5 |
| glycosyltransferase family 1 protein | DW935_08925 | Not Available | Positive | 2107206 - 2108279 | 41182.1 |
| hypothetical protein | DW935_08930 | Not Available | Positive | 2108272 - 2108535 | 9662.33 |
| hypothetical protein | DW935_08935 | Not Available | Positive | 2108493 - 2109269 | 29718.9 |
| alpha-1,2-fucosyltransferase | DW935_08940 | Not Available | Positive | 2109291 - 2110160 | 34023.8 |
| hypothetical protein | DW935_08945 | Not Available | Positive | 2110314 - 2111087 | 30544.4 |
| glycosyltransferase | DW935_08950 | Not Available | Positive | 2111297 - 2112109 | 31635.9 |
| endonuclease | DW935_08960 | Not Available | Negative | 2112954 - 2114372 | 53999.0 |
| glycoside hydrolase family 20 | DW935_08965 | Not Available | Negative | 2114404 - 2115984 | 61286.3 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

