Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_08800 | Not Available | Positive | 2082076 - 2082915 | 32319.1 |
| phosphoglycerate mutase family protein | DW935_08810 | Not Available | Positive | 2084538 - 2085122 | 22881.3 |
| helix-turn-helix transcriptional regulator | DW935_08815 | Not Available | Negative | 2085140 - 2085910 | 29509.5 |
| alpha-galactosidase | DW935_08820 | Not Available | Negative | 2085961 - 2087568 | 60370.3 |
| Trna-pro | Not Available | Not Available | Positive | 2087850 - 2087922 | Not Available |
| Trna-phe | Not Available | Not Available | Positive | 2088103 - 2088175 | Not Available |
| hypothetical protein | DW935_08835 | Not Available | Positive | 2088403 - 2088585 | 7046.41 |
| site-specific integrase | DW935_08840 | Not Available | Positive | 2088624 - 2089715 | 42115.1 |
| site-specific integrase | DW935_08845 | Not Available | Positive | 2090102 - 2091316 | 46705.9 |
| upxy family transcription antiterminator | DW935_08850 | Not Available | Positive | 2092073 - 2092618 | 21310.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

