Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4974 domain-containing protein | DW935_08750 | Not Available | Negative | 2071848 - 2072840 | 37996.7 |
| rna polymerase sigma-70 factor | DW935_08755 | Not Available | Negative | 2072869 - 2073444 | 22588.5 |
| glycoside hydrolase family 92 protein | DW935_08760 | Not Available | Negative | 2073649 - 2075871 | 83529.0 |
| hypothetical protein | DW935_08765 | Not Available | Negative | 2075965 - 2076660 | 26753.6 |
| hypothetical protein | DW935_08770 | Not Available | Positive | 2076820 - 2077098 | 10509.4 |
| arac family transcriptional regulator | DW935_08775 | Not Available | Positive | 2077107 - 2077922 | 31074.5 |
| general stress protein | DW935_08780 | Not Available | Positive | 2077996 - 2078403 | 15299.3 |
| atp-dependent clp protease adaptor clps | DW935_08785 | Not Available | Positive | 2078632 - 2078940 | 12034.5 |
| aaa family atpase | DW935_08790 | Not Available | Positive | 2078958 - 2081186 | 83032.5 |
| leucyl/phenylalanyl-trna--protein transferase | DW935_08795 | Not Available | Positive | 2081282 - 2081935 | 24969.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

