Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 1980873 - 1980959 | Not Available |
| fic family protein | DW935_08435 | Not Available | Positive | 1981136 - 1981945 | 30755.8 |
| duf2971 domain-containing protein | DW935_08440 | Not Available | Negative | 1982216 - 1982986 | 30620.3 |
| tetratricopeptide repeat protein | DW935_08445 | Not Available | Negative | 1982990 - 1984834 | 69967.9 |
| mobilization protein | DW935_08455 | Not Available | Negative | 1985120 - 1986523 | 54386.5 |
| dna primase | DW935_08460 | Not Available | Negative | 1986741 - 1987697 | 36691.7 |
| helicase | DW935_08465 | Not Available | Negative | 1987930 - 1989120 | 46608.1 |
| dna-binding protein | DW935_08470 | Not Available | Negative | 1989125 - 1989439 | 11866.5 |
| hypothetical protein | DW935_08480 | Not Available | Negative | 1990555 - 1991172 | 23790.0 |
| hypothetical protein | DW935_08485 | Not Available | Negative | 1991169 - 1991510 | 12865.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

