Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol acyltransferase | DW935_08275 | Not Available | Positive | 1948659 - 1949477 | 30976.8 |
| gnat family n-acetyltransferase | DW935_08280 | Not Available | Positive | 1949501 - 1950481 | 37508.3 |
| deoxyguanosinetriphosphate triphosphohydrolase | DW935_08285 | Not Available | Negative | 1950570 - 1951901 | 50252.4 |
| dutp diphosphatase | DW935_08290 | Not Available | Positive | 1952124 - 1952558 | 15780.1 |
| tetratricopeptide repeat protein | DW935_08295 | Not Available | Positive | 1952568 - 1954376 | 69707.2 |
| duf4292 domain-containing protein | DW935_08300 | Not Available | Positive | 1954373 - 1955206 | 31437.2 |
| peptidase m23 | DW935_08305 | Not Available | Positive | 1955206 - 1956540 | 50695.0 |
| hypothetical protein | DW935_08315 | Not Available | Negative | 1956712 - 1956921 | 8019.02 |
| rna-binding protein | DW935_08320 | Not Available | Positive | 1957042 - 1957413 | 13160.2 |
| glutaminase | DW935_08325 | Not Available | Negative | 1957728 - 1958642 | 34090.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

