Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyldiphospho-muramoylpentapeptide beta-n- acetylglucosaminyltransferase | DW935_08225 | Not Available | Negative | 1937633 - 1938763 | 40466.6 |
| ftsw/roda/spove family cell cycle protein | DW935_08230 | Not Available | Negative | 1938828 - 1940225 | 51422.2 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | DW935_08235 | Not Available | Negative | 1940249 - 1941583 | 49945.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | DW935_08240 | Not Available | Negative | 1941598 - 1942866 | 47029.8 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | DW935_08245 | Not Available | Negative | 1942879 - 1944333 | 53286.2 |
| pasta domain-containing protein | DW935_08250 | Not Available | Negative | 1944352 - 1946532 | 80341.6 |
| hypothetical protein | DW935_08255 | Not Available | Negative | 1946537 - 1946911 | 14479.4 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | DW935_08260 | Not Available | Negative | 1946916 - 1947830 | 34418.3 |
| transcriptional regulator mraz | DW935_08265 | Not Available | Negative | 1947827 - 1948291 | 18115.8 |
| hypothetical protein | DW935_08270 | Not Available | Negative | 1948326 - 1948553 | 8945.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

