Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-alpha-glucanotransferase | DW935_08175 | Not Available | Negative | 1924918 - 1927596 | 104488.0 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DW935_08180 | Not Available | Negative | 1927924 - 1929888 | 72969.4 |
| 30s ribosomal protein s20 | DW935_08185 | Not Available | Negative | 1930336 - 1930590 | 9698.07 |
| Trna-glu | Not Available | Not Available | Positive | 1930630 - 1930704 | Not Available |
| dna repair protein reco | DW935_08195 | Not Available | Positive | 1930948 - 1931673 | 28652.8 |
| gatb/yqey domain-containing protein | DW935_08200 | Not Available | Negative | 1932214 - 1932663 | 15958.5 |
| cell division protein ftsz | DW935_08205 | Not Available | Negative | 1932685 - 1933989 | 47936.9 |
| cell division protein ftsa | DW935_08210 | Not Available | Negative | 1934027 - 1935529 | 54956.8 |
| cell division protein ftsq | DW935_08215 | Not Available | Negative | 1935533 - 1936270 | 27832.3 |
| udp-n-acetylmuramate--l-alanine ligase | DW935_08220 | Not Available | Negative | 1936267 - 1937643 | 51104.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

