Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DW935_08115 | Not Available | Negative | 1907761 - 1909383 | 59867.8 |
| tonb-dependent receptor | DW935_08120 | Not Available | Negative | 1909395 - 1912475 | 113514.0 |
| hypothetical protein | DW935_08125 | Not Available | Negative | 1912643 - 1912822 | 7034.63 |
| glycoside hydrolase family 97 protein | DW935_08130 | Not Available | Negative | 1912875 - 1915091 | 84360.1 |
| alpha-amylase | DW935_08135 | Not Available | Negative | 1915133 - 1916983 | 70803.9 |
| hypothetical protein | DW935_08140 | Not Available | Positive | 1917232 - 1918827 | 62535.7 |
| hypothetical protein | DW935_08145 | Not Available | Negative | 1918934 - 1919230 | 11332.5 |
| hypothetical protein | DW935_08155 | Not Available | Negative | 1919354 - 1919599 | 9481.4 |
| arac family transcriptional regulator | DW935_08165 | Not Available | Negative | 1922298 - 1922783 | 19011.1 |
| mfs transporter | DW935_08170 | Not Available | Negative | 1923489 - 1924844 | 49088.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

