Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_07915 | Not Available | Positive | 1857283 - 1857591 | 12243.8 |
| arac family transcriptional regulator | DW935_07920 | Not Available | Positive | 1858200 - 1858700 | 19502.5 |
| hypothetical protein | DW935_07925 | Not Available | Positive | 1858766 - 1861183 | 88341.3 |
| hypothetical protein | DW935_07930 | Not Available | Positive | 1861577 - 1862533 | 36422.5 |
| radical sam protein | DW935_07935 | Not Available | Positive | 1862530 - 1863600 | 41120.6 |
| hypothetical protein | DW935_07940 | Not Available | Positive | 1863621 - 1863869 | 8752.23 |
| mfs transporter araj | DW935_07945 | Not Available | Positive | 1864062 - 1865243 | 42069.9 |
| hypothetical protein | DW935_07950 | Not Available | Negative | 1865204 - 1865623 | 15775.0 |
| ribosome maturation factor rimp | DW935_07955 | Not Available | Positive | 1865762 - 1866229 | 17915.3 |
| transcription termination/antitermination protein nusa | DW935_07960 | Not Available | Positive | 1866232 - 1867488 | 47697.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

