Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_07815 | Not Available | Negative | 1836972 - 1837280 | 12084.6 |
| hypothetical protein | DW935_07820 | Not Available | Negative | 1837223 - 1837951 | 28522.1 |
| hypothetical protein | DW935_07825 | Not Available | Positive | 1837977 - 1838420 | 17109.1 |
| duf4491 family protein | DW935_07830 | Not Available | Negative | 1838620 - 1838934 | 12155.1 |
| asnc family transcriptional regulator | DW935_07835 | Not Available | Negative | 1838941 - 1839399 | 17087.9 |
| hypothetical protein | DW935_07840 | Not Available | Negative | 1839516 - 1839899 | 15190.0 |
| hlyc/corc family transporter | DW935_07845 | Not Available | Negative | 1839922 - 1841208 | 48001.9 |
| nudix domain-containing protein | DW935_07850 | Not Available | Positive | 1841343 - 1841867 | 19815.6 |
| tetratricopeptide repeat protein | DW935_07855 | Not Available | Positive | 1841877 - 1844780 | 111213.0 |
| tonb-dependent receptor | DW935_07860 | Not Available | Positive | 1844804 - 1846501 | 64322.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

