Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | DW935_07760 | Not Available | Negative | 1823279 - 1824817 | 59598.5 |
| tonb-dependent receptor | DW935_07765 | Not Available | Positive | 1824869 - 1826941 | 79117.4 |
| sufe family protein | DW935_07770 | Not Available | Negative | 1826977 - 1827405 | 16169.5 |
| glutamine cyclotransferase | DW935_07775 | Not Available | Negative | 1827417 - 1828421 | 37858.6 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | DW935_07780 | Not Available | Negative | 1828490 - 1830247 | 64868.1 |
| phosphate butyryltransferase | DW935_07785 | Not Available | Positive | 1830330 - 1831238 | 33315.3 |
| butyrate kinase | DW935_07790 | Not Available | Positive | 1831251 - 1832315 | 38268.3 |
| helicase | DW935_07795 | Not Available | Negative | 1832453 - 1833703 | 48035.2 |
| is66 family transposase | DW935_07800 | Not Available | Negative | 1834305 - 1835870 | 60643.5 |
| is66 family insertion sequence hypothetical protein | DW935_07805 | Not Available | Negative | 1835957 - 1836307 | 13608.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

