Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DW935_07550 | Not Available | Positive | 1783595 - 1784206 | 22691.8 |
| (fe-s)-binding protein | DW935_07555 | Not Available | Positive | 1784518 - 1785258 | 27278.1 |
| lactate utilization protein | DW935_07560 | Not Available | Positive | 1785255 - 1786622 | 51511.4 |
| hypothetical protein | DW935_07565 | Not Available | Positive | 1786626 - 1787213 | 21730.2 |
| pyruvate formate lyase-activating protein | DW935_07570 | Not Available | Negative | 1787315 - 1788043 | 27977.5 |
| formate c-acetyltransferase | DW935_07575 | Not Available | Negative | 1788112 - 1790340 | 84089.3 |
| Trna-glu | Not Available | Not Available | Positive | 1790544 - 1790619 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 1790972 - 1791061 | Not Available |
| hypothetical protein | DW935_07590 | Not Available | Negative | 1791040 - 1791231 | 7204.75 |
| Trna-cys | Not Available | Not Available | Positive | 1791741 - 1791815 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

