Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome ubiquinol oxidase subunit i | DW935_07500 | Not Available | Negative | 1773544 - 1775046 | 55113.9 |
| duf4492 domain-containing protein | DW935_07505 | Not Available | Negative | 1775070 - 1775288 | 8685.8 |
| tolc family protein | DW935_07510 | Not Available | Positive | 1775442 - 1776785 | 50214.3 |
| efflux rnd transporter periplasmic adaptor subunit | DW935_07515 | Not Available | Positive | 1776810 - 1778033 | 44092.9 |
| abc transporter atp-binding protein | DW935_07520 | Not Available | Positive | 1778075 - 1778818 | 27209.8 |
| abc transporter permease | DW935_07525 | Not Available | Positive | 1778837 - 1780057 | 44142.1 |
| histidine kinase | DW935_07530 | Not Available | Positive | 1780251 - 1781306 | 40206.2 |
| dna-binding response regulator | DW935_07535 | Not Available | Positive | 1781303 - 1782028 | 27866.9 |
| tryptophan-rich sensory protein | DW935_07540 | Not Available | Positive | 1782313 - 1782777 | 18133.8 |
| hemerythrin domain-containing protein | DW935_07545 | Not Available | Positive | 1782903 - 1783598 | 27000.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

