Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:solute symporter | DW935_07450 | Not Available | Positive | 1760106 - 1761539 | 52062.3 |
| nitronate monooxygenase | DW935_07455 | Not Available | Negative | 1761748 - 1762698 | 34201.4 |
| anaerobic c4-dicarboxylate transporter | DW935_07460 | Not Available | Positive | 1762940 - 1764238 | 45864.3 |
| l-asparaginase 2 | DW935_07465 | Not Available | Positive | 1764406 - 1765464 | 37841.8 |
| hypothetical protein | DW935_07470 | Not Available | Positive | 1765552 - 1766721 | 45070.2 |
| dicarboxylate/amino acid:cation symporter | DW935_07475 | Not Available | Negative | 1766926 - 1768104 | 42070.5 |
| phosphogluconate dehydrogenase (nadp(+)-dependent, decarboxylating) | DW935_07480 | Not Available | Positive | 1768189 - 1769625 | 53041.9 |
| glucose-6-phosphate dehydrogenase | DW935_07485 | Not Available | Positive | 1769674 - 1771182 | 58278.9 |
| 6-phosphogluconolactonase | DW935_07490 | Not Available | Positive | 1771244 - 1771948 | 26317.2 |
| cytochrome d ubiquinol oxidase subunit ii | DW935_07495 | Not Available | Negative | 1772244 - 1773389 | 42824.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

