Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_07390 | Not Available | Positive | 1749517 - 1749882 | 13987.2 |
| biotin synthase biob | DW935_07395 | Not Available | Positive | 1749895 - 1750854 | 35602.0 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | DW935_07400 | Not Available | Positive | 1750893 - 1752164 | 47784.3 |
| 8-amino-7-oxononanoate synthase | DW935_07405 | Not Available | Positive | 1752192 - 1753343 | 43026.2 |
| duf452 family protein | DW935_07410 | Not Available | Positive | 1753340 - 1753993 | 25104.3 |
| malonyl-[acyl-carrier protein] o-methyltransferase bioc | DW935_07415 | Not Available | Positive | 1754005 - 1754760 | 28797.8 |
| atp-dependent dethiobiotin synthetase biod | DW935_07420 | Not Available | Positive | 1754775 - 1755419 | 24302.0 |
| hypothetical protein | DW935_07430 | Not Available | Negative | 1755863 - 1756588 | 25779.0 |
| atp-binding cassette domain-containing protein | DW935_07440 | Not Available | Positive | 1757549 - 1758997 | 54998.8 |
| dihydrodipicolinate synthase family protein | DW935_07445 | Not Available | Positive | 1759160 - 1760092 | 34028.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

