Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf87 domain-containing protein | DW935_00295 | Not Available | Positive | 76312 - 79023 | 104171.0 |
| hypothetical protein | DW935_00300 | Not Available | Positive | 79023 - 79661 | 25403.5 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 79335 - 79704 | Not Available |
| hypothetical protein | DW935_00305 | Not Available | Positive | 79666 - 82197 | 95867.3 |
| hypothetical protein | DW935_00310 | Not Available | Positive | 82194 - 82919 | 27878.4 |
| site-specific dna-methyltransferase | DW935_00315 | Not Available | Positive | 83124 - 83894 | 29635.7 |
| duf5045 domain-containing protein | DW935_00320 | Not Available | Positive | 83963 - 84733 | 28584.7 |
| hypothetical protein | DW935_00325 | Not Available | Positive | 84748 - 85881 | 42015.2 |
| hypothetical protein | DW935_00330 | Not Available | Positive | 85881 - 86300 | 17258.9 |
| conjugative transposon protein trak | DW935_00335 | Not Available | Positive | 86307 - 86921 | 23609.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

