Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate-dependent phosphoribosylglycinamide formyltransferase | DW935_07340 | Not Available | Positive | 1734738 - 1735907 | 42895.6 |
| cytochrome c biogenesis protein | DW935_07345 | Not Available | Negative | 1736449 - 1738701 | 86331.5 |
| hypothetical protein | DW935_07350 | Not Available | Negative | 1738821 - 1740440 | 61449.7 |
| hypothetical protein | DW935_07355 | Not Available | Negative | 1740461 - 1740658 | 7117.54 |
| peptidase m75 | DW935_07360 | Not Available | Negative | 1740677 - 1741858 | 42831.0 |
| hypothetical protein | DW935_07365 | Not Available | Negative | 1741892 - 1743226 | 50218.9 |
| rhomboid family intramembrane serine protease | DW935_07370 | Not Available | Negative | 1743867 - 1744532 | 25282.1 |
| 4-alpha-glucanotransferase | DW935_07375 | Not Available | Positive | 1744713 - 1746653 | 74862.2 |
| glycosyltransferase family 1 protein | DW935_07380 | Not Available | Positive | 1746668 - 1747933 | 47628.2 |
| alpha-amylase | DW935_07385 | Not Available | Positive | 1747952 - 1749364 | 53806.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

