Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase | DW935_07290 | Not Available | Negative | 1724597 - 1725403 | 31228.2 |
| duf1573 domain-containing protein | DW935_07295 | Not Available | Negative | 1725612 - 1726025 | 14929.0 |
| diacylglycerol kinase family protein | DW935_07300 | Not Available | Negative | 1726120 - 1726473 | 12967.2 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DW935_07305 | Not Available | Negative | 1726495 - 1728708 | 84511.3 |
| duf4301 family protein | DW935_07310 | Not Available | Positive | 1728852 - 1730369 | 56785.2 |
| n-glycanase | DW935_07315 | Not Available | Positive | 1730489 - 1731739 | 46696.9 |
| dna alkylation repair protein | DW935_07320 | Not Available | Negative | 1731844 - 1732560 | 28361.2 |
| gnat family n-acetyltransferase | DW935_07325 | Not Available | Negative | 1732581 - 1733078 | 19247.4 |
| padr family transcriptional regulator | DW935_07330 | Not Available | Positive | 1733255 - 1733581 | 12456.0 |
| pspc domain-containing protein | DW935_07335 | Not Available | Positive | 1733594 - 1734640 | 38240.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

