Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy-dependent translational throttle protein etta | DW935_07240 | Not Available | Positive | 1707507 - 1709195 | 63671.1 |
| tonb-dependent receptor | DW935_07245 | Not Available | Positive | 1709565 - 1712906 | 123052.0 |
| tonb-dependent receptor | DW935_07250 | Not Available | Positive | 1713381 - 1715978 | 95800.9 |
| duf5017 domain-containing protein | DW935_07255 | Not Available | Positive | 1716000 - 1717892 | 69713.6 |
| rpn family recombination-promoting nuclease/putative transposase | DW935_07260 | Not Available | Positive | 1718290 - 1719147 | 33170.7 |
| 30s ribosomal protein s16 | DW935_07265 | Not Available | Negative | 1719222 - 1719773 | 19788.4 |
| ferritin | DW935_07270 | Not Available | Positive | 1719980 - 1720462 | 17905.2 |
| alpha/beta hydrolase | DW935_07275 | Not Available | Negative | 1720914 - 1721759 | 30944.9 |
| oligopeptide transporter, opt family | DW935_07280 | Not Available | Negative | 1721793 - 1723784 | 69984.6 |
| hypothetical protein | DW935_07285 | Not Available | Negative | 1723870 - 1724631 | 30047.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

