Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kama family protein | DW935_07140 | Not Available | Negative | 1678473 - 1680584 | 81965.4 |
| hypothetical protein | DW935_07145 | Not Available | Negative | 1680659 - 1680868 | 8349.72 |
| six-hairpin glycosidase | DW935_07150 | Not Available | Positive | 1680904 - 1684215 | 126712.0 |
| hydrolase | DW935_07155 | Not Available | Positive | 1684267 - 1687023 | 104359.0 |
| glycoside hydrolase family 28 protein | DW935_07160 | Not Available | Positive | 1687090 - 1688421 | 49440.7 |
| hypothetical protein | DW935_07165 | Not Available | Positive | 1688430 - 1689770 | 49757.6 |
| response regulator | DW935_07170 | Not Available | Negative | 1690233 - 1693370 | 119537.0 |
| helix-turn-helix domain-containing protein | DW935_07175 | Not Available | Positive | 1693708 - 1694544 | 32737.6 |
| duf417 domain-containing protein | DW935_07180 | Not Available | Positive | 1694637 - 1695227 | 21267.4 |
| do family serine endopeptidase | DW935_07185 | Not Available | Positive | 1695549 - 1697072 | 53854.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

