Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp-binding protein | DW935_07080 | Not Available | Negative | 1665327 - 1666979 | 62239.3 |
| xre family transcriptional regulator | DW935_07085 | Not Available | Negative | 1666986 - 1667561 | 21391.5 |
| riboflavin synthase | DW935_07090 | Not Available | Positive | 1667766 - 1668368 | 22635.2 |
| yihy/virulence factor brkb family protein | DW935_07095 | Not Available | Negative | 1668501 - 1669829 | 50578.4 |
| hypothetical protein | DW935_07110 | Not Available | Negative | 1670498 - 1670785 | 11413.6 |
| j domain-containing protein | DW935_07115 | Not Available | Negative | 1670801 - 1671772 | 35196.0 |
| sensor histidine kinase | DW935_07120 | Not Available | Positive | 1671819 - 1673822 | 75546.5 |
| bifunctional metallophosphatase/5'-nucleotidase | DW935_07125 | Not Available | Positive | 1673834 - 1675576 | 65563.7 |
| hypothetical protein | DW935_07130 | Not Available | Positive | 1675581 - 1675919 | 12711.8 |
| tonb-dependent receptor | DW935_07135 | Not Available | Positive | 1676051 - 1678384 | 87138.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

