Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DW935_07025 | Not Available | Positive | 1653004 - 1654290 | 46224.8 |
| l-lactate permease | DW935_07030 | Not Available | Positive | 1654556 - 1656055 | 53058.6 |
| histone h1 | DW935_07035 | Not Available | Positive | 1656225 - 1656398 | 6352.79 |
| duf5113 domain-containing protein | DW935_07040 | Not Available | Positive | 1656547 - 1660944 | 168937.0 |
| dna-binding response regulator | DW935_07045 | Not Available | Positive | 1660974 - 1661702 | 27616.5 |
| transporter | DW935_07050 | Not Available | Positive | 1661692 - 1662408 | 26898.6 |
| Trna-arg | Not Available | Not Available | Positive | 1662478 - 1662551 | Not Available |
| hypothetical protein | DW935_07060 | Not Available | Positive | 1662693 - 1662815 | 4346.13 |
| hypothetical protein | DW935_07065 | Not Available | Positive | 1662760 - 1662963 | 7596.35 |
| transporter | DW935_07075 | Not Available | Positive | 1663445 - 1664794 | 50768.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

