Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 1644636 - 1644708 | Not Available |
| magnesium and cobalt transport protein cora | DW935_06980 | Not Available | Positive | 1644902 - 1645942 | 40193.7 |
| lrp/asnc family transcriptional regulator | DW935_06985 | Not Available | Negative | 1645967 - 1646437 | 17952.8 |
| hypothetical protein | DW935_06990 | Not Available | Positive | 1646617 - 1647042 | 15949.3 |
| deda family protein | DW935_06995 | Not Available | Positive | 1647175 - 1647819 | 24501.6 |
| duf47 domain-containing protein | DW935_07000 | Not Available | Positive | 1647859 - 1648506 | 25182.3 |
| inorganic phosphate transporter | DW935_07005 | Not Available | Positive | 1648523 - 1649536 | 36114.1 |
| hypothetical protein | DW935_07010 | Not Available | Positive | 1649675 - 1650037 | 13832.0 |
| tonb-dependent receptor | DW935_07015 | Not Available | Positive | 1650086 - 1652245 | 82028.8 |
| duf4625 domain-containing protein | DW935_07020 | Not Available | Positive | 1652242 - 1652736 | 18097.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

