Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3868 domain-containing protein | DW935_06875 | Not Available | Negative | 1605279 - 1606688 | 54407.9 |
| duf3575 domain-containing protein | DW935_06880 | Not Available | Negative | 1606695 - 1607267 | 21489.8 |
| duf3868 domain-containing protein | DW935_06885 | Not Available | Negative | 1607271 - 1608365 | 40114.8 |
| duf3575 domain-containing protein | DW935_06890 | Not Available | Negative | 1608394 - 1608960 | 21288.5 |
| site-specific integrase | DW935_06895 | Not Available | Negative | 1609307 - 1610236 | 35816.5 |
| hypothetical protein | DW935_06900 | Not Available | Positive | 1610519 - 1613137 | 98543.3 |
| hypothetical protein | DW935_06905 | Not Available | Negative | 1613143 - 1613757 | 23675.6 |
| hypothetical protein | DW935_06910 | Not Available | Negative | 1613712 - 1614026 | 12303.0 |
| beta-galactosidase | DW935_06915 | Not Available | Positive | 1614198 - 1618502 | 163292.0 |
| transporter | DW935_06920 | Not Available | Positive | 1618593 - 1620191 | 56734.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

