Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | DW935_00245 | Not Available | Positive | 68519 - 69538 | 39148.1 |
| site-specific integrase | DW935_00250 | Not Available | Positive | 69755 - 70885 | 43158.6 |
| hypothetical protein | DW935_00255 | Not Available | Positive | 71019 - 71792 | 29275.3 |
| dna-binding protein | DW935_00260 | Not Available | Positive | 71969 - 72367 | 15553.8 |
| mobilization protein | DW935_00265 | Not Available | Positive | 72345 - 73451 | 41879.3 |
| dna primase | DW935_00270 | Not Available | Positive | 73558 - 74445 | 33989.9 |
| hypothetical protein | DW935_00275 | Not Available | Positive | 74681 - 75133 | 16789.6 |
| duf4134 domain-containing protein | DW935_00280 | Not Available | Positive | 75069 - 75458 | 14146.7 |
| duf4134 domain-containing protein | DW935_00285 | Not Available | Positive | 75519 - 75896 | 13424.2 |
| duf4133 domain-containing protein | DW935_00290 | Not Available | Positive | 75908 - 76201 | 10591.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

