Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4494 domain-containing protein | DW935_06770 | Not Available | Positive | 1586781 - 1587188 | 15531.5 |
| vrr-nuc domain-containing protein | DW935_06775 | Not Available | Positive | 1587586 - 1587939 | 13778.7 |
| hypothetical protein | DW935_06780 | Not Available | Positive | 1587936 - 1588757 | 31864.6 |
| hypothetical protein | DW935_06785 | Not Available | Positive | 1588822 - 1589286 | 17696.8 |
| hypothetical protein | DW935_06790 | Not Available | Positive | 1589475 - 1589657 | 7299.69 |
| hypothetical protein | DW935_06795 | Not Available | Positive | 1589738 - 1590130 | 15032.8 |
| nucleotidyltransferase domain-containing protein | DW935_06805 | Not Available | Negative | 1590954 - 1591244 | 10898.3 |
| upxy family transcription antiterminator | DW935_06810 | Not Available | Negative | 1591312 - 1591812 | 18976.7 |
| hypothetical protein | DW935_06815 | Not Available | Positive | 1592090 - 1592287 | 7987.94 |
| duf3987 domain-containing protein | DW935_06820 | Not Available | Positive | 1592486 - 1594864 | 89984.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

