Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase subunit beta | DW935_06670 | Not Available | Positive | 1573871 - 1575211 | 48803.7 |
| asparagine synthase b | DW935_06675 | Not Available | Positive | 1575228 - 1576898 | 62791.6 |
| hypothetical protein | DW935_06680 | Not Available | Positive | 1576948 - 1577181 | 8584.44 |
| hypothetical protein | DW935_06685 | Not Available | Positive | 1577117 - 1577359 | 9724.73 |
| carboxypeptidase regulatory-like domain-containing protein | DW935_06690 | Not Available | Positive | 1577648 - 1578472 | 31812.3 |
| hypothetical protein | DW935_06695 | Not Available | Negative | 1578783 - 1579658 | 33130.3 |
| hypothetical protein | DW935_06700 | Not Available | Negative | 1579664 - 1579879 | 8414.46 |
| xre family transcriptional regulator | DW935_06705 | Not Available | Negative | 1579884 - 1580357 | 17914.3 |
| hypothetical protein | DW935_06710 | Not Available | Positive | 1580527 - 1580913 | 14974.7 |
| hypothetical protein | DW935_06715 | Not Available | Negative | 1580857 - 1581339 | 18373.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

