Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| [acyl-carrier-protein] s-malonyltransferase | DW935_06570 | Not Available | Positive | 1542719 - 1543606 | 31271.7 |
| phospholipase | DW935_06575 | Not Available | Positive | 1543732 - 1544517 | 29317.4 |
| alpha-amylase | DW935_06580 | Not Available | Positive | 1544533 - 1546230 | 64713.6 |
| hpaii family restriction endonuclease | DW935_06585 | Not Available | Negative | 1546359 - 1547447 | 41445.0 |
| hypothetical protein | DW935_06590 | Not Available | Positive | 1547550 - 1547789 | 9468.92 |
| linear amide c-n hydrolase | DW935_06595 | Not Available | Positive | 1547948 - 1549006 | 39402.4 |
| hypothetical protein | DW935_06600 | Not Available | Positive | 1549241 - 1549699 | 17636.3 |
| hsp20/alpha crystallin family protein | DW935_06605 | Not Available | Positive | 1549964 - 1550407 | 16943.0 |
| response regulator | DW935_06610 | Not Available | Negative | 1550648 - 1552993 | 89808.8 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit | DW935_06615 | Not Available | Negative | 1553161 - 1556388 | 119763.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

