Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | DW935_06520 | Not Available | Positive | 1532201 - 1532983 | 31179.2 |
| glycosyltransferase family 2 protein | DW935_06525 | Not Available | Positive | 1532967 - 1533809 | 32110.5 |
| glycosyltransferase family 1 protein | DW935_06530 | Not Available | Positive | 1533816 - 1534934 | 42660.9 |
| glycosyltransferase family 2 protein | DW935_06535 | Not Available | Positive | 1534931 - 1536136 | 46042.0 |
| response regulator | DW935_06540 | Not Available | Negative | 1536140 - 1536496 | 13485.5 |
| hybrid sensor histidine kinase/response regulator | DW935_06545 | Not Available | Positive | 1536640 - 1538490 | 71055.3 |
| endonuclease | DW935_06550 | Not Available | Positive | 1538494 - 1539555 | 40748.7 |
| hybrid sensor histidine kinase/response regulator | DW935_06555 | Not Available | Negative | 1539560 - 1540699 | 42247.7 |
| sdr family oxidoreductase | DW935_06560 | Not Available | Negative | 1540709 - 1541647 | 35475.6 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | DW935_06565 | Not Available | Positive | 1541768 - 1542592 | 29140.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

