Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-phosphate glucose phosphotransferase | DW935_06365 | Not Available | Positive | 1496949 - 1498352 | 54162.9 |
| glucose-1-phosphate thymidylyltransferase | DW935_06370 | Not Available | Positive | 1498388 - 1499275 | 32727.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DW935_06375 | Not Available | Positive | 1499275 - 1499844 | 21738.7 |
| chain-length determining protein | DW935_06380 | Not Available | Negative | 1500022 - 1501161 | 41526.8 |
| capsule biosynthesis protein | DW935_06385 | Not Available | Negative | 1501169 - 1503661 | 92129.1 |
| xylose isomerase | DW935_06390 | Not Available | Negative | 1503901 - 1505217 | 49038.9 |
| carbohydrate kinase | DW935_06395 | Not Available | Negative | 1505309 - 1506802 | 53461.6 |
| nudix hydrolase | DW935_06400 | Not Available | Negative | 1506975 - 1507709 | 28614.6 |
| response regulator | DW935_06405 | Not Available | Positive | 1508065 - 1508430 | 14101.4 |
| hypothetical protein | DW935_06415 | Not Available | Positive | 1509649 - 1510512 | 32617.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

