Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | DW935_00200 | Not Available | Negative | 52388 - 53245 | 31996.1 |
| duf4924 family protein | DW935_00205 | Not Available | Negative | 53260 - 53802 | 21340.1 |
| lyse family translocator | DW935_00210 | Not Available | Negative | 53874 - 54533 | 24319.7 |
| phosphoribosylformylglycinamidine synthase | DW935_00215 | Not Available | Positive | 54684 - 58388 | 137142.0 |
| hybrid sensor histidine kinase/response regulator | DW935_00220 | Not Available | Positive | 58466 - 62482 | 154443.0 |
| chromate transporter | DW935_00225 | Not Available | Positive | 62487 - 63035 | 20451.8 |
| chromate transporter | DW935_00230 | Not Available | Positive | 63032 - 63604 | 21054.4 |
| hypothetical protein | DW935_00235 | Not Available | Negative | 63891 - 65390 | 58145.5 |
| excinuclease abc subunit uvra | DW935_00240 | Not Available | Positive | 65472 - 68273 | 104858.0 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 68195 - 68305 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

