Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_06205 | Not Available | Negative | 1465778 - 1465993 | 8582.31 |
| hypothetical protein | DW935_06210 | Not Available | Negative | 1466183 - 1467004 | 31185.3 |
| glycosyltransferase | DW935_06215 | Not Available | Negative | 1467141 - 1467893 | 29030.4 |
| glycosyltransferase family 4 protein | DW935_06220 | Not Available | Negative | 1467907 - 1469076 | 44891.1 |
| alpha-1,2-fucosyltransferase | DW935_06225 | Not Available | Negative | 1469081 - 1469902 | 32157.8 |
| acyltransferase | DW935_06230 | Not Available | Negative | 1469904 - 1470494 | 21480.5 |
| glycosyltransferase | DW935_06235 | Not Available | Negative | 1470497 - 1471696 | 46204.5 |
| o-antigen ligase domain-containing protein | DW935_06240 | Not Available | Negative | 1471704 - 1473074 | 53241.1 |
| glycosyltransferase family 2 protein | DW935_06245 | Not Available | Negative | 1473128 - 1474018 | 34644.2 |
| glycosyltransferase family 2 protein | DW935_06250 | Not Available | Negative | 1474042 - 1475064 | 39978.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

