Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinoprotein amine dehydrogenase | DW935_06155 | Not Available | Positive | 1457200 - 1458276 | 39489.4 |
| duf4248 domain-containing protein | DW935_06160 | Not Available | Negative | 1458500 - 1458718 | 8477.29 |
| dna-binding protein | DW935_06165 | Not Available | Positive | 1459070 - 1459558 | 17535.0 |
| n-acetylmuramoyl-l-alanine amidase | DW935_06170 | Not Available | Positive | 1459818 - 1460234 | 15858.4 |
| hypothetical protein | DW935_06175 | Not Available | Negative | 1460282 - 1460530 | 9728.6 |
| hypothetical protein | DW935_06180 | Not Available | Positive | 1460563 - 1460877 | 13007.3 |
| toprim domain-containing protein | DW935_06185 | Not Available | Negative | 1461266 - 1462789 | 58088.9 |
| duf4373 domain-containing protein | DW935_06190 | Not Available | Negative | 1463263 - 1464756 | 56225.0 |
| hypothetical protein | DW935_06195 | Not Available | Negative | 1464990 - 1465247 | 9914.89 |
| putative toxin-antitoxin system toxin component, pin family | DW935_06200 | Not Available | Negative | 1465356 - 1465772 | 16097.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

