Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | DW935_06105 | Not Available | Positive | 1443934 - 1446207 | 87519.2 |
| na+/h+ antiporter nhaa | DW935_06110 | Not Available | Negative | 1446210 - 1447550 | 48637.6 |
| elongation factor 4 | DW935_06115 | Not Available | Negative | 1447682 - 1449463 | 66375.4 |
| duf4276 family protein | DW935_06120 | Not Available | Negative | 1449583 - 1450245 | 25287.4 |
| duf2813 domain-containing protein | DW935_06125 | Not Available | Negative | 1450252 - 1451340 | 41425.4 |
| hypothetical protein | DW935_06130 | Not Available | Negative | 1451541 - 1451744 | 7433.15 |
| c_gcaxxg_c_c family protein | DW935_06135 | Not Available | Negative | 1451901 - 1452404 | 18588.2 |
| d-2-hydroxyacid dehydrogenase | DW935_06140 | Not Available | Negative | 1452448 - 1453404 | 34358.8 |
| replication-associated recombination protein a | DW935_06145 | Not Available | Negative | 1453575 - 1454852 | 47220.9 |
| hypothetical protein | DW935_06150 | Not Available | Positive | 1455093 - 1457168 | 78247.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

