Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yitt family protein | DW935_06005 | Not Available | Negative | 1419684 - 1420574 | 32573.4 |
| lruc domain-containing protein | DW935_06010 | Not Available | Negative | 1420715 - 1422592 | 71278.8 |
| udp-glucose 4-epimerase gale | DW935_06015 | Not Available | Negative | 1422886 - 1423920 | 37984.7 |
| hypothetical protein | DW935_06020 | Not Available | Negative | 1423953 - 1424849 | 33994.2 |
| electron transport complex subunit rsxa | DW935_06025 | Not Available | Negative | 1424991 - 1425593 | 21298.3 |
| electron transport complex subunit e | DW935_06030 | Not Available | Negative | 1425612 - 1426196 | 20626.5 |
| rnfabcdge type electron transport complex subunit g | DW935_06035 | Not Available | Negative | 1426211 - 1427005 | 27023.9 |
| rnfabcdge type electron transport complex subunit d | DW935_06040 | Not Available | Negative | 1427002 - 1427991 | 35342.5 |
| electron transport complex subunit rsxc | DW935_06045 | Not Available | Negative | 1428006 - 1429343 | 47119.8 |
| fe-s cluster domain-containing protein | DW935_06050 | Not Available | Negative | 1429383 - 1430336 | 32597.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

