Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-bladed beta-propeller | DW935_00150 | Not Available | Negative | 42038 - 43132 | 41967.5 |
| hypothetical protein | DW935_00155 | Not Available | Negative | 43221 - 43469 | 9017.95 |
| duf1573 domain-containing protein | DW935_00160 | Not Available | Negative | 43711 - 44577 | 33029.6 |
| hypothetical protein | DW935_00165 | Not Available | Negative | 44581 - 44802 | 7943.79 |
| dna-binding response regulator | DW935_00170 | Not Available | Positive | 45056 - 46054 | 38292.4 |
| hypothetical protein | DW935_00175 | Not Available | Negative | 46818 - 47897 | 40319.9 |
| duf108 domain-containing protein | DW935_00180 | Not Available | Positive | 48194 - 48982 | 28134.8 |
| dihydrofolate reductase | DW935_00185 | Not Available | Negative | 48965 - 49849 | 32605.2 |
| molecular chaperone djla | DW935_00190 | Not Available | Positive | 49956 - 50738 | 29022.9 |
| peptide chain release factor 3 | DW935_00195 | Not Available | Negative | 50813 - 52381 | 59982.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

