Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase hflx | DW935_05795 | Not Available | Negative | 1374882 - 1376135 | 47629.5 |
| ragb/susd family nutrient uptake outer membrane protein | DW935_05800 | Not Available | Negative | 1376227 - 1377813 | 58738.4 |
| tonb-dependent receptor | DW935_05805 | Not Available | Negative | 1377837 - 1380809 | 110311.0 |
| hypothetical protein | DW935_05810 | Not Available | Positive | 1381041 - 1381469 | 16662.0 |
| beta-galactosidase | DW935_05815 | Not Available | Negative | 1382229 - 1384268 | 78172.0 |
| port family protein | DW935_05820 | Not Available | Negative | 1384561 - 1385241 | 25463.0 |
| hypothetical protein | DW935_05830 | Not Available | Positive | 1385726 - 1385914 | 7146.55 |
| Trna-asp | Not Available | Not Available | Positive | 1386857 - 1386933 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 1386960 - 1387036 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 1387064 - 1387140 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

