Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_05645 | Not Available | Negative | 1334599 - 1334934 | 12878.8 |
| thioredoxin | DW935_05650 | Not Available | Negative | 1334970 - 1335284 | 11454.8 |
| dna polymerase iii subunit alpha | DW935_05655 | Not Available | Negative | 1335326 - 1339123 | 143977.0 |
| phosphatidylserine decarboxylase proenzyme | DW935_05660 | Not Available | Positive | 1339315 - 1340001 | 25956.1 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | DW935_05665 | Not Available | Positive | 1340013 - 1340720 | 26073.4 |
| duf4834 family protein | DW935_05670 | Not Available | Positive | 1340773 - 1341075 | 11541.5 |
| nucleoside deaminase | DW935_05675 | Not Available | Negative | 1341079 - 1341513 | 15697.1 |
| hypothetical protein | DW935_05680 | Not Available | Negative | 1341515 - 1341748 | 9401.63 |
| yran family protein | DW935_05685 | Not Available | Positive | 1341824 - 1342189 | 14153.8 |
| mmcq/yjbr family dna-binding protein | DW935_05690 | Not Available | Positive | 1342207 - 1342563 | 13864.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

