Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iv | DW935_05595 | Not Available | Positive | 1325342 - 1326436 | 41305.8 |
| adp-ribosylglycohydrolase | DW935_05600 | Not Available | Negative | 1326417 - 1327205 | 29815.7 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | DW935_05605 | Not Available | Positive | 1327369 - 1328130 | 29056.8 |
| class i fructose-bisphosphate aldolase | DW935_05610 | Not Available | Positive | 1328282 - 1329334 | 38081.5 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DW935_05615 | Not Available | Positive | 1329496 - 1330722 | 45914.5 |
| phospholipase | DW935_05620 | Not Available | Positive | 1330727 - 1331146 | 15918.1 |
| metal abc transporter permease | DW935_05625 | Not Available | Positive | 1331199 - 1332050 | 31184.2 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | DW935_05630 | Not Available | Positive | 1332034 - 1332462 | 16199.1 |
| hypothetical protein | DW935_05635 | Not Available | Positive | 1332524 - 1332745 | 8312.45 |
| plasmid pria4b orf-3 family protein | DW935_05640 | Not Available | Negative | 1332860 - 1334419 | 61141.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

