Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DW935_05545 | Not Available | Negative | 1313298 - 1316195 | 108132.0 |
| hypothetical protein | DW935_05550 | Not Available | Negative | 1316276 - 1316680 | 15580.9 |
| 3-dehydroquinate synthase | DW935_05555 | Not Available | Positive | 1316778 - 1317839 | 39850.1 |
| arac family transcriptional regulator | DW935_05560 | Not Available | Positive | 1318113 - 1318973 | 34056.9 |
| Trna-pro | Not Available | Not Available | Positive | 1319074 - 1319148 | Not Available |
| hypothetical protein | DW935_05570 | Not Available | Negative | 1319477 - 1320223 | 29105.5 |
| hypothetical protein | DW935_05575 | Not Available | Negative | 1320264 - 1320911 | 24358.6 |
| hypothetical protein | DW935_05580 | Not Available | Negative | 1321687 - 1322673 | 38946.7 |
| dna-binding protein | DW935_05585 | Not Available | Negative | 1322720 - 1323511 | 31102.8 |
| site-specific integrase | DW935_05590 | Not Available | Negative | 1323515 - 1324762 | 48727.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

