Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gln | Not Available | Not Available | Positive | 1290894 - 1290964 | Not Available |
| ribosome silencing factor | DW935_05450 | Not Available | Positive | 1291285 - 1291644 | 13409.9 |
| atp-dependent metallopeptidase ftsh/yme1/tma family protein | DW935_05455 | Not Available | Positive | 1291662 - 1293668 | 74660.1 |
| phosphatidate cytidylyltransferase | DW935_05460 | Not Available | Positive | 1293827 - 1294666 | 30824.3 |
| hypothetical protein | DW935_05465 | Not Available | Negative | 1294658 - 1295392 | 27517.9 |
| lipid-a-disaccharide synthase | DW935_05470 | Not Available | Negative | 1295449 - 1296588 | 43097.6 |
| 5'/3'-nucleotidase sure | DW935_05475 | Not Available | Negative | 1296585 - 1297358 | 28332.7 |
| para family protein | DW935_05480 | Not Available | Positive | 1297616 - 1298383 | 28003.1 |
| parb/repb/spo0j family partition protein | DW935_05485 | Not Available | Positive | 1298387 - 1299283 | 33345.2 |
| hypothetical protein | DW935_05490 | Not Available | Positive | 1299353 - 1300060 | 26895.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

