Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1573 domain-containing protein | DW935_05385 | Not Available | Negative | 1274373 - 1275449 | 39188.1 |
| hypothetical protein | DW935_05390 | Not Available | Positive | 1275580 - 1276011 | 17087.8 |
| alpha-2-macroglobulin | DW935_05395 | Not Available | Negative | 1276072 - 1281750 | 213640.0 |
| transcriptional regulator | DW935_05405 | Not Available | Negative | 1282238 - 1282453 | 7860.67 |
| nucleoside deaminase | DW935_05415 | Not Available | Positive | 1283366 - 1283833 | 16967.2 |
| aminoacyl-histidine dipeptidase | DW935_05420 | Not Available | Negative | 1283895 - 1285355 | 53163.5 |
| upf0104 family protein | DW935_05425 | Not Available | Negative | 1285352 - 1286356 | 37225.6 |
| ribosomal rna small subunit methyltransferase a | DW935_05430 | Not Available | Positive | 1286455 - 1287297 | 31939.9 |
| magnesium transporter | DW935_05435 | Not Available | Positive | 1287329 - 1288669 | 49694.8 |
| duf349 domain-containing protein | DW935_05440 | Not Available | Positive | 1288930 - 1290738 | 70097.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

