Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_05335 | Not Available | Negative | 1266286 - 1266747 | 16708.9 |
| mota/tolq/exbb proton channel family protein | DW935_05340 | Not Available | Negative | 1266755 - 1267528 | 27566.2 |
| Trna-ser | Not Available | Not Available | Positive | 1267616 - 1267703 | Not Available |
| tatd family deoxyribonuclease | DW935_05350 | Not Available | Negative | 1267871 - 1268644 | 29294.3 |
| polyprenyl synthetase family protein | DW935_05355 | Not Available | Negative | 1268646 - 1269623 | 36822.8 |
| energy transducer tonb | DW935_05360 | Not Available | Negative | 1269705 - 1270388 | 25649.9 |
| cytidylate kinase | DW935_05365 | Not Available | Positive | 1270574 - 1271263 | 25718.8 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DW935_05370 | Not Available | Positive | 1271256 - 1272122 | 32600.1 |
| 6-phosphofructokinase | DW935_05375 | Not Available | Positive | 1272204 - 1273184 | 35428.5 |
| methylmalonyl co-a mutase-associated gtpase meab | DW935_05380 | Not Available | Negative | 1273273 - 1274370 | 40361.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

