Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonylcarbamoyl-amp synthase | DW935_00100 | Not Available | Negative | 24930 - 25505 | 21163.3 |
| n-acetylglucosamine-6-phosphate deacetylase | DW935_00105 | Not Available | Negative | 25672 - 26835 | 42248.9 |
| acrb/acrd/acrf family protein | DW935_00110 | Not Available | Negative | 26926 - 30102 | 121044.0 |
| tolc family protein | DW935_00115 | Not Available | Negative | 30099 - 31586 | 56925.7 |
| acrb/acrd/acrf family protein | DW935_00120 | Not Available | Negative | 31573 - 34653 | 115358.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW935_00125 | Not Available | Negative | 34658 - 35725 | 39187.2 |
| o-antigen ligase family protein | DW935_00130 | Not Available | Negative | 35778 - 37427 | 61857.2 |
| transglutaminase domain-containing protein | DW935_00135 | Not Available | Negative | 37430 - 38941 | 58282.2 |
| signal peptidase i | DW935_00140 | Not Available | Negative | 38943 - 39845 | 35363.0 |
| hypothetical protein | DW935_00145 | Not Available | Negative | 39854 - 41758 | 73656.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

