Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_05280 | Not Available | Positive | 1259506 - 1260213 | 25991.5 |
| sigma-70 family rna polymerase sigma factor | DW935_05285 | Not Available | Positive | 1260216 - 1260764 | 21091.3 |
| duf5056 domain-containing protein | DW935_05290 | Not Available | Positive | 1260748 - 1261077 | 12355.1 |
| thymidylate synthase | DW935_05295 | Not Available | Positive | 1261159 - 1261953 | 30479.3 |
| dihydrofolate reductase | DW935_05300 | Not Available | Positive | 1262037 - 1262531 | 18849.7 |
| asnc family transcriptional regulator | DW935_05305 | Not Available | Negative | 1262535 - 1263011 | 17875.6 |
| peptidase m64 | DW935_05310 | Not Available | Positive | 1263040 - 1264425 | 52143.5 |
| gnat family n-acetyltransferase | DW935_05315 | Not Available | Positive | 1264460 - 1264996 | 21182.4 |
| biopolymer transporter exbd | DW935_05325 | Not Available | Negative | 1265188 - 1265652 | 17906.9 |
| biopolymer transporter exbd | DW935_05330 | Not Available | Negative | 1265652 - 1266242 | 22472.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

