Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_05220 | Not Available | Negative | 1242684 - 1244072 | 52657.9 |
| gnat family n-acetyltransferase | DW935_05230 | Not Available | Positive | 1245788 - 1246249 | 17857.7 |
| citrate/2-methylcitrate synthase | DW935_05240 | Not Available | Negative | 1246927 - 1248270 | 51161.8 |
| nadp-dependent isocitrate dehydrogenase | DW935_05245 | Not Available | Negative | 1248283 - 1249428 | 41450.7 |
| aconitate hydratase | DW935_05250 | Not Available | Negative | 1249432 - 1251675 | 81112.6 |
| helicase | DW935_05255 | Not Available | Positive | 1251847 - 1253739 | 72832.6 |
| dihydrolipoamide acyltransferase | DW935_05260 | Not Available | Negative | 1253923 - 1254297 | 13047.7 |
| hypothetical protein | DW935_05265 | Not Available | Negative | 1254529 - 1255395 | 33212.5 |
| dna topoisomerase iii | DW935_05270 | Not Available | Positive | 1255669 - 1257810 | 79806.9 |
| rrna cytosine-c5-methyltransferase | DW935_05275 | Not Available | Negative | 1257947 - 1259374 | 53394.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

