Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphofructokinase | DW935_05170 | Not Available | Negative | 1232303 - 1233283 | 35283.2 |
| doxx family protein | DW935_05175 | Not Available | Positive | 1233544 - 1233984 | 16170.6 |
| duf4435 domain-containing protein | DW935_05180 | Not Available | Negative | 1233990 - 1234985 | 39179.5 |
| atp-binding cassette domain-containing protein | DW935_05185 | Not Available | Negative | 1235007 - 1235828 | 31166.5 |
| dmt family transporter | DW935_05190 | Not Available | Positive | 1235911 - 1236837 | 33083.5 |
| sdr family nad(p)-dependent oxidoreductase | DW935_05195 | Not Available | Negative | 1236945 - 1237805 | 31842.1 |
| nadh:flavin oxidoreductase | DW935_05200 | Not Available | Negative | 1237802 - 1239025 | 45522.3 |
| duf1295 domain-containing protein | DW935_05205 | Not Available | Negative | 1239088 - 1239852 | 29466.6 |
| atp-binding protein | DW935_05210 | Not Available | Negative | 1240257 - 1241822 | 59401.5 |
| dna adenine methylase | DW935_05215 | Not Available | Negative | 1241819 - 1242679 | 32758.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

