Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4099 domain-containing protein | DW935_05120 | Not Available | Negative | 1226456 - 1228027 | 59804.1 |
| dna-binding protein | DW935_05125 | Not Available | Negative | 1228048 - 1228398 | 13925.0 |
| dna-binding protein | DW935_05130 | Not Available | Negative | 1228402 - 1228764 | 14059.1 |
| hypothetical protein | DW935_05135 | Not Available | Positive | 1228763 - 1228960 | 7273.61 |
| dna-binding protein | DW935_05140 | Not Available | Positive | 1228966 - 1229265 | 11590.3 |
| dna-binding protein | DW935_05145 | Not Available | Positive | 1229297 - 1229602 | 11724.1 |
| rhum protein | DW935_05150 | Not Available | Negative | 1229680 - 1230042 | 13614.5 |
| site-specific integrase | DW935_05155 | Not Available | Negative | 1230054 - 1231289 | 47891.2 |
| hypothetical protein | DW935_05160 | Not Available | Positive | 1231405 - 1231626 | 8477.03 |
| had family hydrolase | DW935_05165 | Not Available | Positive | 1231640 - 1232293 | 24337.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

