Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoyl synthase | DW935_04810 | Not Available | Positive | 1159199 - 1160053 | 31727.3 |
| hypothetical protein | DW935_04815 | Not Available | Positive | 1160111 - 1161100 | 37752.0 |
| sam-dependent methyltransferase | DW935_04820 | Not Available | Negative | 1161116 - 1161820 | 26022.9 |
| gliding motility lipoprotein gldb | DW935_04825 | Not Available | Negative | 1161844 - 1162845 | 38905.2 |
| enoyl-acp reductase | DW935_04830 | Not Available | Negative | 1162853 - 1163710 | 31326.5 |
| glycoside hydrolase family 28 protein | DW935_04835 | Not Available | Positive | 1164087 - 1165706 | 59146.7 |
| duf4861 domain-containing protein | DW935_04840 | Not Available | Positive | 1165845 - 1167059 | 45677.1 |
| glycoside hydrolase | DW935_04845 | Not Available | Positive | 1167073 - 1168737 | 61567.8 |
| sigma-70 family rna polymerase sigma factor | DW935_04850 | Not Available | Positive | 1168838 - 1169422 | 23161.5 |
| duf4974 domain-containing protein | DW935_04855 | Not Available | Positive | 1169490 - 1170641 | 43733.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

